BioMIP Research Group

Welcome

• Research
  • Synthetic systems self-organization
  • Chemical System Evolution
    • mprDPD - mesoscale simulation
      • Motivation
      • Method
        • DPD
        • Multipole DPD
        • Reactive DPD
        • Software implementation
      • Applications
        • Endocytosis and mprDPD
        • Fusion and fission of vesicles
        • Influence of aggregation on self-replicating spots
        • RAB 5 membrane kinetics
    • EvoSelf - evolving amphiphilic systems
      • Model
      • Widom lattice model statistical mechanics
      • Amphiphile phases in Widom model
      • Combinatorial amphiphiles control multiphase system
      • Interface for evolving amphiphile self-assembly
    • GSA - Genetic Self-assembly
      • Genetic Self Assembly: Motivation
      • Self Assembling Circuits
        • SLB : Self-assembling Logic Block
        • Self-assembly of an evolved multiplier
      • GA for evolution of scalable circuits
        • Coevolution scheme for GSA
        • Evolutionary dynamics of GSA
      • Outlook for GSA
    • EvoCPU - algorithm self-assembly
      • Motivation
      • Micro-controllers and molecules
      • Reducing micro-controller complexity
      • Structured programming
      • The consequences
      • A molecular micro-controller
      • Programming such systems
    • KRD - systems kinetic RD
    • PRESS - stochastic spatial kinetics
      • Motivation
      • PRESS approach
      • Simulations with PRESS
  • Microsystems Chemistry
    • Experiments
    • Microsystem Construction
      • FPFA concepts
      • FPFA silicon based electrode-layer design and fabrication
      • Polyimide based electrode layer
      • Soft-lithography and assembly
    • Integrated experimental platform
  • PACE
    • Artificial Cells in PACE
    • Evolutionary Self-assembly
    • Microfluidic complementation systems
    • Electronic chemical cell
    • The omega machine
    • Project coordination
  • Hepatosys
    • Mesoscale systems simulation
    • Protein sorting
      • a hierarchy of successively simpler Heinrich models
        • heinrich 4 XY csize 4 ves antisym norm
          • Original Heinrich Model
        • heinrich 4 XY csize 4 ves types
          • heinrich 4 XY constant size 4 vesicle types
        • heinrich original with cargo and sizes
          • Heinrich Model Simplified ODE:4
      • combinatorially complex sorting
      • DPD model with explicit compartments
        • Heinrich model via DPD
      • spatially resolved Heinrich model
      • stochastic diffusive Heinrich models
    • Collaboration partners
• Team
  • John McCaskill
  • Sigrid McCaskill
  • Uwe Tangen
  • Patrick Wagler
  • Thomas Maeke
  • Johannes Ott
  • Andras Czövek
  • Jana Bagheri-Maurer
  • BioMIP team at a glance
    • John
    • Sigrid
    • Uwe
    • Patrick
    • Thomas
    • Johannes
    • Jana
    • Andras
• Press Reports
  • Year 2009
  • Year 2008
  • Year 2007
  • Year 2006
  • Year 2005
• Publications
• Contact
• Job opportunities
• Site Map of BioMIP Research Group
• Disclaimer
  • German